Your current Browser session contains No Studies (No Result Sets).
To add new data to the Browser use the Studies and Phenotypes links above.
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Key
  • This Genome View shows marker significance data for all chromosomes, or a selected chromosome. goto Show Marker Summary for selected studies.
  • Coloured bars show significant regions and can be clicked to see a region in more detail.
  • View marker reports for:
    1. The most significant
      markers for selected studies
    2. A region of interest by clicking on a coloured bar of interest
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Settings
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Marker Summary
  • This table shows the total markers above the -log p-value threshold for each selected study.
  • Use the links in the 'Go to Markers' column to see (up to) the top 50 markers with the highest significances.
  • To see more detailed marker information go to the high-resolution Region View tab and click on a marker of interest.
Study Phenotype Go to
Markers		 No. markers with
-log p-value >= 3
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Settings
Threshold for highlighting: Scale type for stacked bars:
  • To create a marker report for a region, use the Region View to zoom in until individual markers are displayed.
Please Note: If you have searched for a gene and multiple regions meet your search criteria, you need to go back to the Region View tab and select one of the transcripts.
Bin Sizes
Low resolution bin size:
High resolution bin size:
Tracks in Region View
Ideogram UCSC RefSeq Genes
Significant markers for single studies Significant markers across all Result Sets
Stacked counts of significant markers (high-resolution) Stacked counts of significant markers (low-resolution)
Marker coverage for selected studies (high-resolution) Marker coverage for selected studies (low-resolution)
Line plot of maximum -log P values (high-resolution) HGMD variants
Other Settings
View width in pixels:
Number of rows of chromosomes:
Color selection:
               
Show significant markers across studies present in at least: studies